CDS

Accession Number TCMCG051C06550
gbkey CDS
Protein Id XP_024451752.1
Location join(2971505..2971769,2971858..2971946,2972558..2972650,2973083..2973144,2973372..2973478,2977209..2977301,2977554..2977594)
Gene LOC18096146
GeneID 18096146
Organism Populus trichocarpa

Protein

Length 249aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024595984.1
Definition beta-carotene isomerase D27, chloroplastic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Beta-carotene isomerase D27
KEGG_TC -
KEGG_Module -
KEGG_Reaction R10282        [VIEW IN KEGG]
KEGG_rclass RC01640        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K17911        [VIEW IN KEGG]
EC 5.2.1.14        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
GOs GO:0001763        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005506        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010223        [VIEW IN EMBL-EBI]
GO:0010346        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016106        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901334        [VIEW IN EMBL-EBI]
GO:1901336        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901600        [VIEW IN EMBL-EBI]
GO:1901601        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGCAAGATTTCTTTGTCAAACTAGAAGTCCTGTTCCATCCCTGCCGCGACAGAAGCGTGCTTGTAAGCTCAAACATCGCTCTCCTGTTCTTGCCGTTCTAACAAGAACACCAGATAATAATATGACTGGAGAGGAAAAGAAAGCTTCGCATCCTACTGATATGTTAGCAGGACTTACGAAAAATACTACTGTCTATAACGATAGCTGGTTGGCTAAGCTAGCTATAAACTATCTATCGCAGCGATTTCAAGATGCAACAGGGATGAGAAACAGCAAGAGAGATTATGAGAGCTTGACACAGACAGCTAGAGATACATGGCGGAAATTCAGTCCAACTCAACAACACGAGGTAAAGATCATGCTACCACAGTGCACGTTTACAAGAGAATATTTTGCTGCCTTCACAACCTTGTTCTTTGTTTGGCTAGTCGGACCCTGCGAGGTGCGGGAATCCGACTTCAATGGAAGAAAAGAAAAGAATGTGGTTCACATAAAAAAGTGCAGGTTTTTAGAGGAGACAGACTGTATTGGGATGTGTACTAATCTATGCAAGGTTCCAAGTCAAACATTTATCAAGCACTCCTTTGGAATGCCAGTTAACATGGTTCCAAATTTTGATGATATGAGCTGTGAGATGATATATGGCCAGGAACCTCCTGCGATAACTGAAGATCCAGCATTCAAGCAGCCATGTTATAAACTATGCAAAGAAAACCGAAAGCACAGTATGCAATGCTCGAGCTAA
Protein:  
MDARFLCQTRSPVPSLPRQKRACKLKHRSPVLAVLTRTPDNNMTGEEKKASHPTDMLAGLTKNTTVYNDSWLAKLAINYLSQRFQDATGMRNSKRDYESLTQTARDTWRKFSPTQQHEVKIMLPQCTFTREYFAAFTTLFFVWLVGPCEVRESDFNGRKEKNVVHIKKCRFLEETDCIGMCTNLCKVPSQTFIKHSFGMPVNMVPNFDDMSCEMIYGQEPPAITEDPAFKQPCYKLCKENRKHSMQCSS